Inhaltsverzeichnis

Taxonomic Backbones

Taxon Names Resolver: http://resolver.globalnames.org/

An overview by Christian for the MDB project, transfered and updated by Peter

GBIF Open Tree of Life WikiData Catalogue of Life ITIS NCBI
no. of species 2.5 million 2.3 million 2.1 million 1.6 million 374.000
no. of taxa 5.3 million 724,000 506.000
sources 60% Catalogue of Life 40% 50 other sources Mainly NCBI, GBIF and IRMNG, other smaller data bases All items in wikidata describing a taxon. Numerous bots. 158 data bases
API rest api rest api SPARQL web service Web service (wsdl) Web site
Download Darwin Core Archive Collection of csv files - - MySQL, Postgres and others bcp-like dump files (Microsoft)
Last update 8/2016 9/2016continuously continously 10/2016 9/2016 2016
example http://api.gbif.org/v1/species/5231190 https://tree.opentreeoflife.org/opentree/argus/opentree7.0@ott93302 http://tinyurl.com/jnoqoep http://www.catalogueoflife.org/col/webservice?name=Platalea+leucorodia https://www.itis.gov/ https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=drosophila+miranda

GBIF

Open Tree of Life reference

WikiData

Proposal

The GBIF Taxonomic Backbone provides the best coverage of taxa, ensures high data quality and frequent updates. However wiki data has a superior language management and valuable additional data. For the benefit of the MDB users these data should be combined.

This can be easily achieved with two queries to the public apis of both providers, linked by the GBIF id.

Example “Wattwurm”:

Both entries are linked by the GIBIF ID 5197443.