====== BioCASe Provider Software for LIB ====== ; URL : https://biocase.smns-bw.org ; MySQL : ; ABCD 2.1 : [[https://archive.bgbm.org/TDWG/CODATA/Schema/ABCD_2.1/ABCD_2.1.html|HTML]], [[https://archive.bgbm.org/TDWG/CODATA/Schema/ABCD_2.1/ABCD_2.1.XSD|XSD]] All collection data are made available to the public using the BioCASe provider software. Data are transfered from DiversityCollection into a MySQL cache database installed on the Hetzner server. Several MySQL views provide the data for mapping to ABCD within the provider software. ====== Infrastructure ====== Biocase is setup in Docker. ===== File strucure for BPS ===== ''/var/data/biocase'' - root folder \\ ''/var/data/biocase/config'' - bps configuration \\ ''/var/data/biocase/archive'' - bps archive files \\ ''/var/data/biocase/downloads'' - bps download files \\ ''/var/data/biocase/biocase_media'' - media and barcode files \\ ''/var/data/biocase/resources'' - openseadragon and logos \\ ''/var/data/biocase/database'' - MySQL database for BPS ====== Installation ====== Documentation for installation: https://wiki.bgbm.org/bps/index.php/Installation#Installing_BioCASe_from_a_Docker_image ===== Requirements ===== ; Docker ; Compose file : [[biocase:docker_compose|docker-compose.yml]] **Start:** On manager host (hetzner) ''docker-compose up -d''